Published in Nature - plant evolution from gene scans

Released in Nature magazine, new paper explores the evolutionary history of plants through DNA analysis.

Researchers at the University of Adelaide have been a part of this exciting task. There are three genomes to analyse in plants, within their:

• nucleus


• mitochondria (the battery-like power centres of the cell)


• chloroplasts (the solar cell like structures that convert light into energy)

During this particular research, the chloroplast genome have been the focus.

The cost of genomics has been reducing enabling this global group of scientists to work together, including Prof Andy Lowe and Ed Biffin State Herbarium of South Australia. They were able to sequence over 400 groups of genes from over 1000 plant species that span the diversity of life on earth – from algae, through mosses and ferns, conifers, orchids and grasses, through tropical trees and onto roses and daisies (the most recently evolved groups).

Sequence data from so many genes, has enabled the evolution of a species to be traced. Analysis of large groups of genes now enables incidents of genome duplication or gene family expansion to be easily identified.

This research found plant evolution included:

• tree of life genome duplication


• periods of rapid speciation


• massive expansion in the number and complexity of genes


• periods of extinction

Growth in the number and complexity of genes predates the origin of all plants, but also land plants and vascular plants (those with stems). Other findings included whole-genome duplications have occurred repeatedly throughout the evolution of flowering plants and ferns.

The availability of high-quality plant genome sequences and advances in functional genomics has given an insight into the evolutionary history of plants never seen before.

Adapted from Biodiversity Revolution.
Summary of paper recent published in Nature "One thousand plant transcriptomes and the phylogenomics of green plants"
Image from Nature Magazine and Alaina Petlewsk, from Fay-Wei Li's labratory